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AT3G10912.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.903
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : conserved peptide upstream open reading frame 63
Curator
Summary (TAIR10)
Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF63 represents a conserved upstream opening reading frame relative to major ORF AT3G10910.1
Computational
Description (TAIR10)
conserved peptide upstream open reading frame 63 (CPuORF63); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EMBL:CP002686EnsemblPlants:AT3G10912EnsemblPlants:AT3G10912.1entrez:6241435
GeneID:6241435Gramene:AT3G10912.1KEGG:ath:AT3G10912PaxDb:B3H6C7
Proteomes:UP000006548RefSeq:NP_001118612.1TAIR:AT3G10912tair10-symbols:CPuORF63
UniProt:B3H6C7
Coordinates (TAIR10) chr3:-:3413676..3413744
Molecular Weight (calculated) 2633.11 Da
IEP (calculated) 4.06
GRAVY (calculated) 0.13
Length 22 amino acids
Sequence (TAIR10)
(BLAST)
1: MRDIDSLFSI SFVIRFVQQD ES
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)