AT3G10490.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAC domain containing protein 52 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAC domain containing protein 52 (NAC052); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, pollen development; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 50 (TAIR:AT3G10480.1); Has 3394 Blast hits to 3360 proteins in 132 species: Archae - 4; Bacteria - 13; Metazoa - 65; Fungi - 17; Plants - 3017; Viruses - 4; Other Eukaryotes - 274 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:3268075..3270608 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51294.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.42 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.87 | ||||||||||||||||||||||||||||||||||||||||
| Length | 451 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGRESVAVVT APPSATAPGT ASVATSLAPG FRFHPTDEEL VSYYLKRKVL GQPVRFDAIG EVDIYKHEPW DLAVFSRLKT RDQEWYFYSA LDKKYGNGAR 101: MNRATNRGYW KATGKDREIR RDILLLGMKK TLVFHSGRAP DGLRTNWVMH EYRLVEYETE KNGNLVQDAY VLCRVFHKNN IGPPSGNRYA PFMEEEWADD 201: EGALIPGIDV KLRLEPPPVA NGNDQMDQEI QSASKSLINI NEPPRETAPL DIESDQQNHH ENDLKPEEHN NNNNYDENEE TLKREQMEEE ERPPRPVCVL 301: NKEAPLPLLQ YKRRRQSESN NNSSRNTQDH CSSTTTTVDN TTTLISSSAA ATNTAISALL EFSLMGISDK KEKPQQPLRP HKEPLPPQTP LASPEEKVND 401: LQKEIHQMSV ERETFKLEMM SAEAMISILQ SRIDALRQEN EELKKNNANG Q |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)