AT3G09240.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase protein with tetratricopeptide repeat domain | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G01060.1); Has 27971 Blast hits to 27600 proteins in 1024 species: Archae - 10; Bacteria - 1536; Metazoa - 3854; Fungi - 205; Plants - 21349; Viruses - 84; Other Eukaryotes - 933 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2835668..2837956 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54333.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.92 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||
| Length | 477 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIERTNLIVL AADNKEEDEG STCPNFLEFS LEQLRVATDG FSADNIVSEH NERVPNIVYK GQLNDGRKIA VKRFQRLSWP DSLEFIEEAQ AVGRCRSEHM 101: ANLIGCCSEG HERLLVAEYM PNETLAKHLF HWEKRPMKWE MRLRVALHTA TALEYCNDWG IDLYHDLNTY RILFDKVGNP RLSCFGLMKC SREGKSYSTN 201: LAFAPPEYLR LGTVIPESVT FSFGTLLLDL MSGRHIPPNH ALDLFRGKNY LVLMDSALDG QFSDEDRTEL IHLASRCLRP EPDERPSIKF LMSALSRLEK 301: RAELWPNVKE ENIPTPSYTE PATKEPLPLT PFGEACWRVD LSGMHELLEK LGYGEDDVVV TNEFSFQMWT GQMQENMDYK KHGDAAFRAK DFETAIEFYT 401: EFMSGAPVVS PTVLARRCLC YLMSDMFREA LSDAMQTQVA SPEFSIALYL QAACLLKLGM EAEAKEALRH GSSLEAF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)