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AT3G06930.2
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.921
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein arginine methyltransferase 4B
Curator
Summary (TAIR10)
Encodes an type I protein arginine methyltransferase. PRMT4b can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.
Computational
Description (TAIR10)
protein arginine methyltransferase 4B (PRMT4B); CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4A (TAIR:AT5G49020.1); Has 2741 Blast hits to 2716 proteins in 617 species: Archae - 50; Bacteria - 577; Metazoa - 1204; Fungi - 251; Plants - 344; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G06930-MONOMERBioCyc:ARA:GQT-2653-MONOMERBioGrid:5213EC:2.1.1.319
eggNOG:ENOG410XPDDeggNOG:KOG1500EMBL:AC016827EMBL:AK228202
EMBL:BT004102EMBL:BT015414EMBL:CP002686EnsemblPlants:AT3G06930
EnsemblPlants:AT3G06930.2entrez:819878Gene3D:3.40.50.150GeneID:819878
Genevisible:Q84W92GO:GO:0005634GO:GO:0005737GO:GO:0005829
GO:GO:0006351GO:GO:0006355GO:GO:0008469GO:GO:0009909
GO:GO:0010228GO:GO:0016277GO:GO:0019919GO:GO:0034970
GO:GO:0034971GO:GO:0034972GO:GO:0035241GO:GO:0035242
GO:GO:0042803GO:GO:0046982hmmpanther:PTHR11006hmmpanther:PTHR11006:SF10
HOGENOM:HOG000198522InParanoid:Q84W92IntAct:Q84W92InterPro:IPR025799
InterPro:IPR029063iPTMnet:Q84W92KEGG:ath:AT3G06930KO:K05931
OMA:QSVCISEPANTHER:PTHR11006PaxDb:Q84W92Pfam:PF05185
Pfam:Q84W92Pfscan:PS51678PhylomeDB:Q84W92PRIDE:Q84W92
PRO:PR:Q84W92PROSITE:PS51678ProteinModelPortal:Q84W92Proteomes:UP000006548
RefSeq:NP_187349.2RefSeq:NP_850528.1SMR:Q84W92STRING:3702.AT3G06930.2
SUPFAM:SSF53335TAIR:AT3G06930tair10-symbols:ATPRMT4Btair10-symbols:PRMT4B
UniGene:At.18748UniProt:Q84W92
Coordinates (TAIR10) chr3:-:2185469..2189296
Molecular Weight (calculated) 59918.00 Da
IEP (calculated) 4.79
GRAVY (calculated) -0.25
Length 535 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQQ DIQTPNDELE EELLQQLPQN PSAQL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)