AT3G06870.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.966 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : proline-rich family protein | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
proline-rich family protein; Has 89 Blast hits to 86 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 52; Fungi - 7; Plants - 12; Viruses - 4; Other Eukaryotes - 12 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2167931..2168758 | ||||||||||||||||
| Molecular Weight (calculated) | 23617.40 Da | ||||||||||||||||
| IEP (calculated) | 4.11 | ||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||
| Length | 214 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIINPPKMPP HLTISLIASA ASPPPPLLMT LVASLCDSIL LKAQSPNPLE ILSKKSPEKL LLPQPTDLDL NTFLPNDEPP PPPIPFVGVS ETTLLGLSSS 101: SSTITSMPPP PPTLMEEIRF AEEDEEEEEE DEEEAASMFF FFLARRNGRL LLLVESLPLL ADERDRAREV VEGVKDLGEE EERWLGLGTG KEEVTSLPSF 201: SWRHKAQIPP GFFV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)