AT3G03690.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.930 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unfertilized embryo sac 7 (UNE7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process, double fertilization forming a zygote and endosperm, pollen tube development; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT4G27480.2); Has 941 Blast hits to 940 proteins in 124 species: Archae - 0; Bacteria - 56; Metazoa - 535; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:911494..913643 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43825.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.36 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||
| Length | 378 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAIKKLLMIS FSLTSLLFSL LYIIPTTKTL FTSSKIPSLP LESNQNSNST LPCFAYLISA SKGDAGKLKR LLRSLYHRRN HYLIHLDLEA PEEEHLEMIR 101: FVAGEPLFQP EGNVMIVGKP NLVTYRGPTM LATTLHAMAL LLRCCRWDWF INLSASDYPL VTQDDLIYAF SELPRDLNFI QHTSRLGWKM NKRGKPIIID 201: PGLYSLNKSE IWWVSNQRSL PTSFKLFTGS AWTFLSRPFA EYCIIGYDNL PRTLLLYYTN FVSSPEGYFQ TLICNSDEFK NTTVNHDLHY IAWDNPPKQH 301: PKILGTRDYR KMVMSNRPFA RKFKSNDPVL NRIDREILRR KRKLGSKPDL GPGPGARRLK SLLMRLLLRR NFVNRQCR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)