AT3G03460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17510.1); Has 19732 Blast hits to 8747 proteins in 456 species: Archae - 0; Bacteria - 449; Metazoa - 7438; Fungi - 2099; Plants - 1550; Viruses - 53; Other Eukaryotes - 8143 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:823069..824485 | ||||||||||||||||||||
| Molecular Weight (calculated) | 41463.70 Da | ||||||||||||||||||||
| IEP (calculated) | 4.79 | ||||||||||||||||||||
| GRAVY (calculated) | -1.08 | ||||||||||||||||||||
| Length | 354 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEESKQQQLQ QQQLLLQMQQ QQQMQQRQQQ LFLMQHLQKQ QQQQAAMSMF PPNADAHLRP PGLIPNRPVN PFLQNVNPNP NLIQQANKFQ QQQQQQMMMM 101: MQQQQLQQQQ QQKLMRPSNQ LEIQFAYQDA WRVCHPDFKR PFASLEDACE RLLPYHVVAD YEAEEDDSIF DSNTTSQTLP RCQQWDNNIA AKVAEFTATF 201: EGQVQAFDRI IQKRSDGDRV EERLMMEQVL LNDERNACIQ LDREMKAQDA RLRMAALAQA AGQARAEESQ QSHAEMMARN PLRANAIGNH GEQGRNMNPN 301: EMMLLMNGWG NNNNNNNSQK EEKEPLEDFL NDEENENGEH EKWRRSGDFD LNIR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)