AT3G03240.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, sepal, carpel; EXPRESSED DURING: 4 anthesis, C globular stage; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G03230.1); Has 714 Blast hits to 712 proteins in 165 species: Archae - 4; Bacteria - 327; Metazoa - 0; Fungi - 44; Plants - 306; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:-:746781..748291 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38538.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.57 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||
| Length | 333 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLFLTAAVCL ICFYVYKSVK PPPPIPLPEN VSEISPRIKL NDGRYLAYKE LGFPKDKAKN KIIILHGFGS SKLVDLKITQ EMIDEFEIYF LLFDRAGYGE 101: SDPHPSRTLK TDTYDIEELA DKLQIGPKFH VLGMSLGAYP VYGCLKYIPH RLSGATLVVP ILNFWWSCLP LNLSISAFKK LPIQNQWTLG VAHYFPWLLY 201: WWMTQKWFSP FSQNPRETMT ERDIELADKH TKHAYIKESA LRQGEYVSMQ RDIIAGYENW EFDPTELSNP FSDDNKGSVH IWCALEDKQI SHEVLLYLCD 301: KLPWIKLHEV PDAGHLIIHE KQHFEDIIKA ACS |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)