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AT3G02930.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
endoplasmic reticulum 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22923678 (2012): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant protein of unknown function (DUF827)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant protein of unknown function (DUF827); LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G16730.1); Has 245110 Blast hits to 119184 proteins in 3857 species: Archae - 3264; Bacteria - 55991; Metazoa - 95493; Fungi - 19215; Plants - 14009; Viruses - 1145; Other Eukaryotes - 55993 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKUHeggNOG:ENOG410Y9W9EMBL:AC018363EMBL:CP002686
EnsemblPlants:AT3G02930EnsemblPlants:AT3G02930.1entrez:821180ExpressionAtlas:Q9M8T5
GeneID:821180Genevisible:Q9M8T5GO:GO:0005783GO:GO:0005875
GO:GO:0009507hmmpanther:PTHR23160HOGENOM:HOG000239041InParanoid:Q9M8T5
iPTMnet:Q9M8T5ncoils:CoilOMA:NAVEQTKPaxDb:Q9M8T5
Pfam:Q9M8T5PhylomeDB:Q9M8T5PRIDE:Q9M8T5PRO:PR:Q9M8T5
ProteinModelPortal:Q9M8T5Proteomes:UP000006548RefSeq:NP_186943.1TAIR:AT3G02930
UniGene:At.53163UniProt:Q9M8T5
Coordinates (TAIR10) chr3:+:655306..658319
Molecular Weight (calculated) 91864.30 Da
IEP (calculated) 4.75
GRAVY (calculated) -0.95
Length 806 amino acids
Sequence (TAIR10)
(BLAST)
001: MASKIKNGLS DTTLRKSSST SLRVPRLTRI VTKPDSNSPS PTQQQSRLSF ERPSSNSKPS TDKRSPKAPT PPEKTQIRAV RVSESQPQSV QIKEDLKKAN
101: ELIASLENEK AKALDQLKEA RKEAEEASEK LDEALEAQKK SLENFEIEKF EVVEAGIEAV QRKEEELKKE LENVKNQHAS ESATLLLVTQ ELENVNQELA
201: NAKDAKSKAL CRADDASKMA AIHAEKVEIL SSELIRLKAL LDSTREKEII SKNEIALKLG AEIVDLKRDL ENARSLEAKV KELEMIIEQL NVDLEAAKMA
301: ESYAHGFADE WQNKAKELEK RLEEANKLEK CASVSLVSVT KQLEVSNSRL HDMESEITDL KEKIELLEMT VASQKVDLEK SEQKLGIAEE ESSKSEKEAE
401: KLKNELETVN EEKTQALKKE QDATSSVQRL LEEKKKILSE LESSKEEEEK SKKAMESLAS ALHEVSSESR ELKEKLLSRG DQNYETQIED LKLVIKATNN
501: KYENMLDEAR HEIDVLVNAV EQTKKQFESA MVDWEMREAG LVNHVKEFDE EVSSMGKEMN RLGNLVKRTK EEADASWEKE SQMRDCLKEV EDEVIYLQET
601: LREAKAETLK LKGKMLDKET EFQSIVHEND ELRVKQDDSL KKIKELSELL EEALAKKHIE ENGELSESEK DYDLLPKVVE FSEENGYRSA EEKSSKVETL
701: DGMNMKLEED TEKKEKKERS PEDETVEVEF KMWESCQIEK KEVFHKESAK EEEEDLNVVD QSQKTSPVNG LTGEDELLKE KEKKKKKTLF GKVGNLLKKK
801: GPVNQK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)