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AT3G02645.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.510
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Plant protein of unknown function (DUF247)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50150.1).
Protein Annotations
eggNOG:ENOG410IKCCeggNOG:ENOG410YDVREMBL:AC021640EMBL:CP002686
EnsemblPlants:AT3G02645EnsemblPlants:AT3G02645.1entrez:10723101GeneID:10723101
GO:GO:0016021Gramene:AT3G02645.1hmmpanther:PTHR31549hmmpanther:PTHR31549:SF23
HOGENOM:HOG000240208InterPro:IPR004158KEGG:ath:AT3G02645OMA:CPFKMMD
PaxDb:P0C897Pfam:P0C897Pfam:PF03140PRO:PR:P0C897
ProteinModelPortal:P0C897Proteomes:UP000006548RefSeq:NP_001189794.1TAIR:AT3G02645
TMHMM:TMhelixUniGene:At.75544UniProt:P0C897
Coordinates (TAIR10) chr3:+:566271..567860
Molecular Weight (calculated) 61402.20 Da
IEP (calculated) 5.54
GRAVY (calculated) -0.16
Length 529 amino acids
Sequence (TAIR10)
(BLAST)
001: MLPKKPIFSS TEQHRFDETR WVINVQKSLD AELEEHDLEE VTVSIFNVPK ALMCSHPDSY TPHRVSIGPY HCLKPELHEM ERYKLMIARK IRNQYNSFRF
101: HDLVEKLQSM EIKIRACYHK YIGFNGETLL WIMAVDSSFL IEFLKIYSFR KVETLINRVG HNEILRDIMM IENQIPLFVL RKTLEFQLES TESADDLLLS
201: VLTGLCKDLS PLVIKFDDDQ ILKAQFQECN HILDFLYQMI VPRIEEEELE EDDEENRADE NGGNRAIRFM DEIKHQFKRV FASRPADLIL RFPWRIISNL
301: PGFMALKLSA DYLFTRQENE ATTTRQESVS ILDIEKPPLV EELTIPSVSD LHKAGVRFKP TAHGNISTVT FDSNSGQFYL PVINLDINTE TVLRNLVAYE
401: ATNTSGPLVF TRYTELINGI IDSEEDVRLL REQGVLVSRL KSDQEAAEMW NGMSKSVRLT KVGFLDKTIE DVNRYYTGRW KVKIGRLVEV YVYGSWQILA
501: FLAAVLLLML VSLQLFSLVF SSFLRFRAG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)