AT3G02250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.971 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-fucosyltransferase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G15740.1); Has 830 Blast hits to 821 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 830; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:424185..426376 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59734.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.48 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||
| Length | 512 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MCKAEKFLYH RKLWEMKVKF LGDSKIDKLK NSLVLRSRMS LWMIRAMTIL LLWSCFVHLV AVGEMWGPRL LKGWPSCFNH HDFPIAAEMT SLPMKIALPP 101: KRIYQNNGYL MVSCNGGLNQ MRAAICDMVT IARYMNVTLI VPELDKTSFW NDPSEFKDIF DVDHFISSLR DEVRILKELP PRLKRRVRLG LYHTMPPISW 201: SNMSYYQDQI LPLVKKYKVV HLNKTDTRLA NNELPVEIQK LRCRANFNGL RFTPKIEELG RRVVKILREK GPFLVLHLRY EMDMLAFSGC SHGCNRYEEE 301: ELTRMRYAYP WWKEKVIDSE LKRKEGLCPL TPEETALTLS ALGIDRNVQI YIAAGEIYGG KRRLKALTDV FPNVVRKETL LDSSDLSFCK NHSSQMAALD 401: YLISLESDIF VPTYYGNMAK VVEGHRRFLG FKKTIELNRK LLVKLIDEYY EGLLSWEVFS TTVKAFHATR MGGPKRRLVI PNKPKEEDYF YANPYECLQL 501: LHENNGNSLE ET |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)