AT3G02125.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39200.1); Has 2247 Blast hits to 1434 proteins in 202 species: Archae - 4; Bacteria - 111; Metazoa - 942; Fungi - 239; Plants - 140; Viruses - 37; Other Eukaryotes - 774 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||
| Coordinates (TAIR10) | chr3:+:378205..379382 | ||||||||||||||||||||
| Molecular Weight (calculated) | 40037.80 Da | ||||||||||||||||||||
| IEP (calculated) | 5.02 | ||||||||||||||||||||
| GRAVY (calculated) | -0.98 | ||||||||||||||||||||
| Length | 355 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METKTENKEH QWKDSVSSRS SSRSSSITSA SSDGHFDIRH FPLPKPSLSA SEAQKLRESH QAYNSSVSSY TSSSWSSNHQ NHLIDLPGYD PTRIPSSVFS 101: SKPGNSTEWS LASNESLFSI HDGNFSISTA LRLAEIPRFE ETVHVITEIN SVPLPPPVKK PNEYEKETIA EKEPYQVENS NSDIEDNEEE EKMSEVESDD 201: EHEEEQTDMI EAEALVEKEV IETVKENKPE DSNSIVSHSP SISCRSDTSN NSIGSFAFPL LQKEDAVTKT PSMQIKGNVS HKRRPEYQLP QSRMLQPQQQ 301: LQPYSESNML TESQPEPQPQ RKASKKFESR TQSLKASRTC WFSCFHCPSK CGSFK |
||||||||||||||||||||
| See Also |
|
||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)