AT3G01840.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.568 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G33580.1); Has 52720 Blast hits to 52395 proteins in 2921 species: Archae - 39; Bacteria - 3156; Metazoa - 18439; Fungi - 2605; Plants - 22696; Viruses - 193; Other Eukaryotes - 5592 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:296582..298634 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73166.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.18 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 654 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVSVSKQYM TSLVVILLFI SLSSLSPTST SHSCDPVEEE EEASSFGYVC HSNLQKCHTF AILRAKPPFY SLSDLSRHLG LDADDEYVPK GQLLLIPIEC 101: RCNGSIYEAS LIKNCVKGDT FRSVSQSLQG LTTCLSIREK NPHISEDKLG DNIKLRLAIR CSCPQEGVSN ASFLVTYPVG VRDSVSSLAV RFNTTEDAIV 201: SANNKSGVVP LKPALIPLDH KPEKQGSRKR NPSKKKRSKM KLMIAVSSAI AGVCGLVTLM VFGYLHWKKE TQIQTQTQKW ISNKDPETRQ LSLSIRTTSD 301: KKISFEGSQD GSILDSHNTV GTTTPRKPVL EIYAFEELEK ATENFSSSNH IKGSVYFGSL KGKDLAIKQV NADEMKRFDF GLLNDQSHYY NHNVIRVLGT 401: CFREIDQDSY LVFEYARNGS LWDWIQNKLA IKNQFIESCY CFLAWKQRIK ICHDVAIALK YMHRINYVHG NIKSRNIFLN EDLRGKVGNF GMSKCVTNEL 501: ATEENLIESS LSPASDIFAY GIIVMEVLSG QTPDMLLGLQ EVETTSLGTQ ETFVSEWSRL RRLLGDKEKL REVMDSTLGE SYSVDSAFEI ASIARDCTAE 601: EAESRPSAVE IAERVSRLVD DDEDEEDEAV IDRESTLISE SSYKPLVKKS SIID |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)