AT3G01085.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: CDC2C (TAIR:AT5G39420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:+:28060..30556 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 71389.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.09 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.67 | ||||||||||||||||||||||||||||||||||||||||
| Length | 629 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCFNSKHSS PAGPPRPVRR RLDTNVHRSH TQDPHNRHVL PGPPSHRRVV NSSPKKHRNN DDDAPKSRTT GVSLRSGLPH SNVEAEQVAA GWPSWLSSAA 101: PEAVHGWVPL RAEDFEKREK IGQGTYSNVF RACEVSTGRV MALKKIRIQN FETENIRFIA REIMILRRLD HPNIMKLEGI IASRNSNSMY FVFDYMEHDL 201: EGLCSSPDIK FTEAQIKCYM KQLLWGVEHC HLRGIMHRDI KAANILVNNK GVLKLADFGL ANIVTPRNKN QLTSRVVTLW YRAPELLMGS TSYSVSVDLW 301: SVGCVFAEIL TGRPLLKGRT EIEQLHKIYK LSGSPDEEFW EKNKLHPQTK MFRPQHQYEG CLRERFDEFP KTAINLLENL LSIDPEKRGT ASSALMSEYF 401: NTQPYACDPS TLPKYPPNKE MDAKYREELQ RRRRVSIKKR DNLATKKLGK SRRATVKEPT NLNRLPTHQE TKKEAETEIV VQTPSETSQA TTRSEFPYNS 501: LSQTTAPASG FAWAGTKKRK ENDVASTLTY IQPGSASHVS GMSMAFAKNT FGLTINEDKP FLRPHVSLDP SDVLLFSGVN HKKTEEDMDL TNLGANPKIF 601: QTNGMNEILR RTESDVRVGV RRPPRIERG |
||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)