AT2G47570.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Ribosomal protein L18e/L15 superfamily protein | ||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 755 Blast hits to 755 proteins in 295 species: Archae - 15; Bacteria - 0; Metazoa - 328; Fungi - 154; Plants - 126; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). | ||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:19515898..19516717 | ||||||
| Molecular Weight (calculated) | 14902.20 Da | ||||||
| IEP (calculated) | 11.15 | ||||||
| GRAVY (calculated) | -0.40 | ||||||
| Length | 135 amino acids | ||||||
| Sequence (TAIR10) (BLAST) |
001: MSKVNKAPLS LSRLVRYMDG KDGKIAVIVG TVTDDVRIED VPALTVTALR FTESARARIH KAGGECLTFD QLALPCPTWS ENTVLLRGPK NTREAVKHFG 101: PAPGVPHSHT KPYVRQTGKK IEIARGRRRS RGFKV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)