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AT2G46640.3
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.967
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages.
Protein Annotations
eggNOG:ENOG410J60XeggNOG:ENOG41113D4EMBL:CP002685EnsemblPlants:AT2G46640
EnsemblPlants:AT2G46640.3entrez:819276ExpressionAtlas:F4IJ79GeneID:819276
Gramene:AT2G46640.3hmmpanther:PTHR38366InParanoid:F4IJ79OMA:MTIFNWV
PaxDb:F4IJ79Proteomes:UP000006548RefSeq:NP_001189764.1STRING:3702.AT2G46640.3
TAIR:AT2G46640UniGene:At.36483UniProt:F4IJ79
Coordinates (TAIR10) chr2:+:19148792..19150751
Molecular Weight (calculated) 32531.60 Da
IEP (calculated) 5.91
GRAVY (calculated) -0.80
Length 283 amino acids
Sequence (TAIR10)
(BLAST)
001: MTIFNWVQKK LHQNVIKEID GVRKNEKKKR NEGISEIEKN TKAILDQVGL VDALDNWFDG VLTIGTFGFD TLNFKEEDEM DDDECGSGDL DYVVIDGSII
101: KNVDQESDPL ISVENKFYDH HEDVGNLYVQ ADTDHFGSIK TAETPAVTAA AEAEIEPQKK RTTLAELFME DHDKGYDTWH CKKPNNPNLD GEEVKYYKQN
201: GSKLSKRFSF VKKKLVMSKS KEEENDLRPI KKMRQMIKRM LKKKIHPDVD ATKALKKDVP YKPTRNCEAL ESHYLLKIQD CVA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)