AT2G46270.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : G-box binding factor 3 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3??s DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
G-box binding factor 3 (GBF3); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 2 (TAIR:AT4G01120.1); Has 2450 Blast hits to 2449 proteins in 240 species: Archae - 2; Bacteria - 73; Metazoa - 742; Fungi - 108; Plants - 1402; Viruses - 3; Other Eukaryotes - 120 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:19000859..19002901 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38599.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.81 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.01 | ||||||||||||||||||||||||||||||||
| Length | 359 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGNSSEEPKP PTKSDKPSSP PVDQTNVHVY PDWAAMQAYY GPRVAMPPYY NSAMAASGHP PPPYMWNPQH MMSPYGAPYA AVYPHGGGVY AHPGIPMGSL 101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ 201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGNERELKRE RRKQSNRESA RRSRLRKQAE TEELARKVEA LTAENMALRS ELNQLNEKSD KLRGANATLL 301: DKLKCSEPEK RVPANMLSRV KNSGAGDKNK NQGDNDSNST SKLHQLLDTK PRAKAVAAG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)