AT2G46225.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ABI-1-like 1 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. One of four ABI-like proteins. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ABI-1-like 1 (ABIL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: actin nucleation, trichome morphogenesis; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 3 (TAIR:AT5G24310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:18982113..18984074 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36357.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.91 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||
| Length | 329 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METEISGMDN PAMTLDEVSM ERNKSFVKAL QELKNLRPQL YSAADYCEKS YLHSEQKQMV LDNLKDYTVK ALVNAVDHLG TVASKLTDLF DHQNSDISTM 101: EMRASCVSQQ LLTCRTYIDK EGLRQQQLLA VIPLHHKHYI LPNSVNKRVH FSPLRRTDTR QNHYQAISRL QPSGAMSSSL SLLVNNTSSQ ISNSLSNMLG 201: LTHLDAPASK SLSWHLGSET KSTLKGTSTV APSSKDSKAF SKTSGVFHLL GDDENIANKK PLAGSQVSGV PAASTAHKDL EVPKLLTAHR SLDNNPRREI 301: IQAPVRTKSV LSAFFVKQKT PKLKAGYVS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)