AT2G45570.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.663 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 76, subfamily C, polypeptide 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP76C | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 76, subfamily C, polypeptide 2 (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:18779935..18781922 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57259.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.96 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 512 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDIIFEQALF PLFCFVLSFF IIFFTTTRPR SSRKVVPSPP GPPRLPIIGN IHLVGRNPHH SFADLSKTYG PIMSLKFGSL NTVVVTSPEA AREVLRTYDQ 101: ILSSRTPTNS IRSINHDKVS VVWLPPSSSR WRLLRKLSAT QLFSPQRIEA TKTLRENKVK ELVSFMSESS EREEAVDISR ATFITALNII SNILFSVDLG 201: NYDSNKSGVF QDTVIGVMEA VGNPDAANFF PFLGFLDLQG NRKTLKACSE RLFKVFRGFI DAKLAEKSLR DTNSKDVRER DFVDVLLDLT EGDEAELNTN 301: DIVHLLLDLF GAGTDTNSST VEWAMAELLR NPETMVKAQA EIDCVIGQKG VVEESDISAL PYLQAVVKET FRLHPAAPLL VPRKAESDVE VLGFMVPKDT 401: QVFVNVWAIG RDPNVWENSS RFKPERFLGK DIDLRGRDYE LTPFGAGRRI CPGLPLAVKT VPLMLASLLY SFDWKLPNGV GSEDLDMDET FGLTLHKTNP 501: LHAVPVKKRG RN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)