AT2G44890.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:endoplasmic reticulum 0.821 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cytochrome P450, family 704, subfamily A, polypeptide 1 | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
member of CYP704A | ||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cytochrome P450, family 704, subfamily A, polypeptide 1 (CYP704A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 2 (TAIR:AT2G45510.1); Has 29290 Blast hits to 29187 proteins in 1500 species: Archae - 44; Bacteria - 2609; Metazoa - 10818; Fungi - 6322; Plants - 8342; Viruses - 3; Other Eukaryotes - 1152 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:18508392..18510290 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 57930.90 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.43 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||
Length | 505 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAIIVVTTIF ILLSFALYLT IRIFTGKSRN DKRYTPVHAT IFDLFFHSHK LYDYETEIAR TKPTFRFLSP GQSEIFTADP RNVEHILKTR FHNYSKGPVG 101: TVNLADLLGH GIFAVDGEKW KQQRKLVSFE FSTRVLRNFS YSVFRTSASK LVGFIAEFAL SGKSFDFQDM LMKCTLDSIF KVGFGVELGC LDGFSKEGEE 201: FMKAFDEGNG ATSSRVTDPF WKLKCFLNIG SESRLKKSIA IIDKFVYSLI TTKRKELSKE QNTSVREDIL SKFLLESEKD PENMNDKYLR DIILNVMVAG 301: KDTTAASLSW FLYMLCKNPL VQEKIVQEIR DVTSSHEKTT DVNGFIESVT EEALAQMQYL HAALSETMRL YPPVPEHMRC AENDDVLPDG HRVSKGDNIY 401: YISYAMGRMT YIWGQDAEEF KPERWLKDGV FQPESQFKFI SFHAGPRICI GKDFAYRQMK IVSMALLHFF RFKMADENSK VSYKKMLTLH VDGGLHLCAI 501: PRTST |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)