AT2G43930.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.955 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: amino acid transmembrane transporter activity, protein kinase activity, ATP binding; INVOLVED IN: amino acid transport, protein amino acid phosphorylation, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid/polyamine transporter I (InterPro:IPR002293), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: NPK1-related protein kinase 3 (TAIR:AT3G06030.1); Has 2640 Blast hits to 2639 proteins in 271 species: Archae - 0; Bacteria - 15; Metazoa - 830; Fungi - 681; Plants - 688; Viruses - 0; Other Eukaryotes - 426 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:18193188..18195582 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 23630.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.07 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||||||
| Length | 204 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDHHRRLHTI KILIRNSSTT LLFFKIVPIL LHRSGGDSRA LPYTPFFCSL CRNALGHGNV TSEPHIVLLL QCRKKSWCFA SEFEHLKLFK GYIDEDEERH 101: KFGHKGVLVA REEEVQLLKN LSHPNIVRYL GTVRESDSLN IMMQFVPGGS ISSLLAKFGS FPEPKHHNRY LLDNAFISHY KSVKNIHQQS FKIEIDPRKE 201: KKQS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)