AT2G42250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.946 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 712, subfamily A, polypeptide 1 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP712A | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 712, subfamily A, polypeptide 1 (CYP712A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 712, subfamily A, polypeptide 2 (TAIR:AT5G06905.1); Has 33836 Blast hits to 33605 proteins in 1717 species: Archae - 51; Bacteria - 3923; Metazoa - 11889; Fungi - 7248; Plants - 9502; Viruses - 6; Other Eukaryotes - 1217 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:17600075..17601709 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58064.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.07 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 514 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDLKLNTKLI ILITSLAFPF MLYALFKWFL KEQGSLAATK LPQSPPALPF IGHLHLIGKV LPVSFQSLAH KYGPLMEIRL GASKCVVVSS SSVAREIFKE 101: QELNFSSRPE FGSAEYFKYR GSRFVLAQYG DYWRFMKKLC MTKLLAVPQL EKFADIREEE KLKLVDSVAK CCREGLPCDL SSQFIKYTNN VICRMAMSTR 201: CSGTDNEAEE IRELVKKSLE LAGKISVGDV LGPLKVMDFS GNGKKLVAVM EKYDLLVERI MKEREAKAKK KDGTRKDILD ILLETYRDPT AEMKITRNDM 301: KSFLLDVFMA GTDTSAAAMQ WAMGQLINHP QAFNKLREEI NNVVGSKRLV KESDVPNLPY LRAVLRETLR LHPSAPLIIR ECAEDCQVNG CLVKSKTRVL 401: VNVYAIMRDS ELWADADRFI PERFLESSEE KIGEHQMQFK GQNFRYLPFG SGRRGCPGAS LAMNVMHIGV GSLVQRFDWK SVDGQKVDLS QGSGFSAEMA 501: RPLVCNPVDH FNTF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)