AT2G41750.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.878 What is SUBAcon? |
|||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : DTW domain-containing protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
DTW domain-containing protein; CONTAINS InterPro DOMAIN/s: DTW (InterPro:IPR005636); Has 487 Blast hits to 487 proteins in 220 species: Archae - 0; Bacteria - 322; Metazoa - 93; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:-:17421746..17422507 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 28436.50 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.09 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.34 | ||||||||||||||||||||||||||||
| Length | 253 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEDEQDAHHR RQICDNCDRP NAICLCHVLP ADLIPTNTEI IILHHPHESR HKLNTTPLLT KSLLNVTRIP ARRLLRRHIS TAGGTALPAP PTIYLFPSSP 101: SSPAVTISEF KSLNLLNHRE ISNPPPLRLI VFDATWKHAK EMVKASEVVL REAGAVRVCL DTEIDASVSG GTIYDSELVL RKEPFGGCVT TAEAVARCLG 201: AIEPDGEEIE RKLISVLKEM VRFQSKYLKP MKPRPKLLKK RFQNQQPLEQ EEE |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)