AT2G41470.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41440.1); Has 1066 Blast hits to 825 proteins in 144 species: Archae - 7; Bacteria - 46; Metazoa - 465; Fungi - 36; Plants - 67; Viruses - 4; Other Eukaryotes - 441 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:17289952..17293749 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 48767.90 Da | ||||||||||||||||||||||||
| IEP (calculated) | 8.08 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.07 | ||||||||||||||||||||||||
| Length | 414 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MCNYCEFSSN RYGCGSSEQD NVLREKVERL RFLIKRMTGK DDDAHFTELQ ALESRLKDVS RTVLDQKEKM IKLEEDERKK EAQNESDGTR RGVLVPCNSS 101: EQRQRDDGAL LLLKKARFER RYSESLQSEF ERLWLVNERM NGRELEGMSS RDLLSLDNQI LNALLGLLVQ MNRPREEQVA ARQREKNNKE STSRLAEQER 201: YSSDNDKDDD TSSPFLKRRR RDLTKDARLL CDFCGLSSSR RYDELRPHKQ EHEALSMESE VKRLRLLTRM TGKDLDGLSF EELQVLRNRL DDVLPIVEKH 301: MDKMKLEEAA KKNEAGVDNE GTRRRRVLVP CRFSNRGSGE GQQKQEDGAP PVSRRQREFE KRKAEPMHRE LERLWLLKER MNGRELTSMS YMELNILWDQ 401: IHHGFHGLHE HLNV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)