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AT2G41290.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : strictosidine synthase-like 2
Curator
Summary (TAIR10)
Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.
Computational
Description (TAIR10)
strictosidine synthase-like 2 (SSL2); FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G57030.1); Has 1076 Blast hits to 1064 proteins in 215 species: Archae - 3; Bacteria - 245; Metazoa - 227; Fungi - 12; Plants - 478; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1199-MONOMEReggNOG:COG3386eggNOG:KOG1520EMBL:AC005662
EMBL:AF076979EMBL:BT015732EMBL:BT020191EMBL:CP002685
EnsemblPlants:AT2G41290EnsemblPlants:AT2G41290.1entrez:818728Gene3D:2.120.10.30
GeneID:818728Genevisible:Q9SLG8GO:GO:0005773GO:GO:0005783
GO:GO:0009058GO:GO:0016020GO:GO:0016788Gramene:AT2G41290.1
gramene_plant_reactome:1119438gramene_plant_reactome:6875241hmmpanther:PTHR10426hmmpanther:PTHR10426:SF29
HOGENOM:HOG000223915InParanoid:Q9SLG8InterPro:IPR004141InterPro:IPR011042
InterPro:IPR018119KEGG:ath:AT2G41290OMA:NENKWISPANTHER:PTHR10426
PaxDb:Q9SLG8Pfam:PF03088Pfam:Q9SLG8PhylomeDB:Q9SLG8
PIR:A84840PRIDE:Q9SLG8PRO:PR:Q9SLG8ProteinModelPortal:Q9SLG8
Proteomes:UP000006548RefSeq:NP_181661.1SMR:Q9SLG8STRING:3702.AT2G41290.1
SUPFAM:SSF63829TAIR:AT2G41290tair10-symbols:SSL2UniGene:At.42854
UniProt:Q9SLG8
Coordinates (TAIR10) chr2:-:17210599..17212904
Molecular Weight (calculated) 41477.60 Da
IEP (calculated) 6.64
GRAVY (calculated) -0.15
Length 376 amino acids
Sequence (TAIR10)
(BLAST)
001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)