AT2G40955.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.991 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G15096.1); Has 89 Blast hits to 89 proteins in 21 species: Archae - 0; Bacteria - 3; Metazoa - 18; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:17093093..17095132 | ||||||||||||||||
| Molecular Weight (calculated) | 80175.70 Da | ||||||||||||||||
| IEP (calculated) | 9.78 | ||||||||||||||||
| GRAVY (calculated) | -0.67 | ||||||||||||||||
| Length | 679 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKSRRRISWE EINESWLNGL CVFCKEPEAP DHHMKHKNLG LLMIYGNDDH LSNGGIGESI DHRSMNLVHE EREEHSKLDN HKDLVQRTIM EEREEHSNSE 101: ILKSVEPREV NFGLENLDSV VMNEYQEQDW VKQNMNKRFE VEDDVDRGQK LLSITENCSA HQVFGKTSQH EEKLEIKKKA KGFKSWMFKF KLAKKTIRKR 201: DNKGWFHTWS RKVGWRKNKP MKLQFVSHQV KESSHRDKDS FAGKKSIKQE MCVEVESLLQ QQDLRRIKET QADQGDSYVV VRKLLPHLES VCATKSFLDN 301: DSMSKLEAEL TDSKMRTAGV TQHQVSIFVM ETSHHHQVLE DFDMHMVIED QQPIVTEALR LISNDFHSDV AELCEQLTCD ESHKPKQRLA PKSWMFKYRR 401: DHKILHSPTM SRNVRMVVFR KMEAAERSQH LVTHRFHVGP LEMDTQDSEI GIIEVLRRVM MLFQNSIVQA KMMVTKRKKT FYKSRRFKFK HRVVPRALQY 501: GFEVKMKQKV STEYPCLFLI GKEAELVHIL LGYRDVMFNL KKKGRFRLFQ SFSKQLLLWL RHDALLIKPF LLSDERFQIK HTWRTKFIHS VSSIGVGHYE 601: YSIWTQSDKG TQLFYSRRLV VYKLGSEAKN VVEVSQRVYQ LVKLKFAKDE RKLEVIQSQT FDPGIGIESQ ELLENTYSN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)