AT2G40560.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.816 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G40500.1); Has 76144 Blast hits to 75559 proteins in 2528 species: Archae - 130; Bacteria - 8777; Metazoa - 30183; Fungi - 9064; Plants - 14404; Viruses - 235; Other Eukaryotes - 13351 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:16938705..16939616 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34938.80 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.13 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.45 | ||||||||||||||||||||||||||||||||||||
| Length | 303 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMMEQICRDD DWIVDESSLT KLSSLGRGNF GYVSLEKDSN SRLYAKKSSP MHLKKILEKE LRIMHRFRDH PRIVQASNKL HLQIQPYEYC YIYMEYASKG 101: NLHRFIYGFR RKEEPIPESL VSRTARMILE GLEALHSHGY VYCDLKPSNV LLFPSTTPGE PWDLKLADFG SSKEPDTDHD PTSLGTVEYM PPDSFVPNGL 201: IDPGHIDPAL DIYSLGCVVN EMFGAIPIQE YFDEFYVWHL RDVISPQAQD FLRRCDDMRS RRPTATELLK HPFITQGLPS PTTEDNKEIS RSLIPSFSKL 301: LLT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)