AT2G39790.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Mitochondrial glycoprotein family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, mitochondrial matrix; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT2G39795.1); Has 277 Blast hits to 277 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 68; Plants - 185; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:16594833..16595800 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27136.40 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.02 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||||||
| Length | 240 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAFAWCVRRS ASKLASACGQ ARSISAVVNR PSLALNPSPL SPFVSRGFLY TMAVDKLSSE QTLHLVIDSE LNSALQTDDP NLNEEMAPGS FPLKIRDKPG 101: DQSVTLTAYY NDERIHVDVG MPYLGDDVID VFGPNNDELS FPLVVTVIKK NGVSIEFTCQ AYADYIDLTD LTVHDYQYQM GETDWPRFKN LDDNLKKAFH 201: RYLATRLDAN ITKLLHKYMV SKIKREYLLW LKNVNKFVDG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)