AT2G39630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nucleotide-diphospho-sugar transferases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a putative dolichyl-phosphate β-glucosyltransferase. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G20575.1); Has 14679 Blast hits to 14665 proteins in 2386 species: Archae - 662; Bacteria - 10857; Metazoa - 271; Fungi - 260; Plants - 99; Viruses - 22; Other Eukaryotes - 2508 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:16522008..16524561 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38338.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.08 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.02 | ||||||||||||||||||||||||||||||||||||||||
| Length | 336 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEFLVTVAEF SLWLLLIVLF GFLSVVVFEA WRRRHSNVSV ETVTTLDDPK SIKPIPCPHI TDPAEKYLSL IVPAYNEELR LPAALEETMD YLQDRASRDK 101: SFSFEVVIVD DGSVDGTKRV AFDFIRKYTI DNIRVIPLGK NQGKGEAIRK GMLHSRGQLL LMLDADGATK VTDLEKLENQ INAVAREEYS IRNPASKDMD 201: FKIGDVQVSA FGSRAHLEEK ALATRKWYRN FLMKGFHLVV LLAAGPGIRD TQCGFKMFTR AAARRLFTNV HLKRWCFDVE LVYLCKRFNI PMVEISVKWS 301: EIPGSKVSML SIPNMLWELA LMSVGYRTGM WKIHQV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)