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AT2G39500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.910
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J82UeggNOG:ENOG410Z2P8EMBL:AC004218EMBL:AY037187
EMBL:CP002685EnsemblPlants:AT2G39500EnsemblPlants:AT2G39500.1entrez:818535
GeneID:818535GO:GO:0016021Gramene:AT2G39500.1HOGENOM:HOG000238699
KEGG:ath:AT2G39500OMA:RFWIASFPhylomeDB:O80637PIR:T00560
Proteomes:UP000006548RefSeq:NP_565907.1STRING:3702.AT2G39500.1TAIR:AT2G39500
TMHMM:TMhelixUniGene:At.19577UniProt:O80637
Coordinates (TAIR10) chr2:+:16489091..16489374
Molecular Weight (calculated) 6558.98 Da
IEP (calculated) 10.04
GRAVY (calculated) -0.35
Length 55 amino acids
Sequence (TAIR10)
(BLAST)
1: MATRFDVKTI VKDKRFWIAS FIIVWAAGLQ GHMMWLQKQE SFKQKFGTID EDDHK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)