AT2G38720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytoskeleton What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : microtubule-associated protein 65-5 | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
microtubule-associated protein 65-5 (MAP65-5); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1); Has 9645 Blast hits to 7381 proteins in 767 species: Archae - 226; Bacteria - 1139; Metazoa - 4615; Fungi - 969; Plants - 706; Viruses - 30; Other Eukaryotes - 1960 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:16188047..16192102 | ||||||||
| Molecular Weight (calculated) | 67140.90 Da | ||||||||
| IEP (calculated) | 7.77 | ||||||||
| GRAVY (calculated) | -0.71 | ||||||||
| Length | 587 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MSPSSTTTCT SLLEELQMIW DEIGESYNER DKMLLELEQE CLDIYNKKVE KTRKFRAELQ RSLAQAEAEI ASLMSALGEK VSFAKKKEGS LKEQISSVKP 101: VLEDLLMKKD RRRKELSETL NQIAEITSNI AGNDYTVSSG SEVDESDLTQ RKLDELRADL QDLRNEKAVR LQKVNSYISA VHELSEILSF DFSKALNSVH 201: SSLTEFSKTH SKSISNDTLA RFTELVKSLK AEKHERLLKL QGLGRSMQEL WNLMETPMDE RRRFDHCSSL LSSLPDDALK KGCLSLDIIR EAEDEVRRLN 301: SLKSSKMKEL VFKRQCELEE ICRGNHMDIN SDAARKSLVE LIESGDGDLS DILASIDGQI EKAREEALSR KEILDKVDKW RHAKEEETWL DDYEKDENRF 401: SAVRGAHKNL KRAEKARSLI SKIPVFKQFN KKFWALLFSP KQLFKFSNSI IDYCENSTTH SMVDVLTTKV KAWEKERGVP FLCDKQPLLQ TLEDDIVIRA 501: QREEEKRQFR EQKRLQGQLA TEKEAKYGSK SAKKKPLGQS LNTDNVTKTP IGRRIGNTPG RSVTSGGKDY RGNAVIPLNY VALQKDD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)