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AT2G38680.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 5'-nucleotidases;magnesium ion binding
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
5'-nucleotidases;magnesium ion binding; FUNCTIONS IN: magnesium ion binding, 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IE (InterPro:IPR006434); Has 332 Blast hits to 332 proteins in 84 species: Archae - 4; Bacteria - 0; Metazoa - 264; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ZQJ8eggNOG:KOG3128EMBL:CP002685EnsemblPlants:AT2G38680
EnsemblPlants:AT2G38680.1entrez:818450Gene3D:3.40.50.1000GeneID:818450
GO:GO:0000287GO:GO:0005829GO:GO:0008253Gramene:AT2G38680.1
hmmpanther:PTHR13045hmmpanther:PTHR13045:SF0InterPro:IPR006434InterPro:IPR023214
KEGG:00230+3.1.3.5KEGG:00240+3.1.3.5KEGG:00760+3.1.3.5KEGG:ath:AT2G38680
KO:K01081OMA:VFNEEGCPaxDb:F4ITW1Pfam:PF05822
PRIDE:F4ITW1ProteinModelPortal:F4ITW1Proteomes:UP000006548Reactome:R-ATH-429958
Reactome:R-ATH-73621RefSeq:NP_181402.4SMR:F4ITW1STRING:3702.AT2G38680.1
SUPFAM:SSF56784TAIR:AT2G38680UniGene:At.53069UniProt:F4ITW1
Coordinates (TAIR10) chr2:-:16174011..16175873
Molecular Weight (calculated) 35787.70 Da
IEP (calculated) 4.76
GRAVY (calculated) -0.30
Length 315 amino acids
Sequence (TAIR10)
(BLAST)
001: MEPCELSANT VIAHPRALTD KMTLIRDAGP SKFQVIADFD ATLTRYRVNG LRGRQTSHGL LQQGDAYYDA KRQALYDHYH PLEISPVIPI DEKTKLMEEW
101: WGKTHELLIE GGLTYDAIKK SVANSSIAFR EGVSELFEFL EKKEIPVLIF SAGLADVIEE VLRQNLDRTF KNVKIVSNRM VFNDDGQLVS FKGKLIHVLN
201: KNEHALDMAA PLHDRLGVDI GEEDEENVNM KERRNVLLMG DHLGDLRMSD GLDYETRISI GFLNDNIEKS LESYRESFDL VYLNDAPMWG ALELVSRLFS
301: TEAINLTAFI DVKEP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)