AT2G38150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha 1,4-glycosyltransferase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, Golgi stack; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 454 Blast hits to 450 proteins in 114 species: Archae - 0; Bacteria - 88; Metazoa - 237; Fungi - 18; Plants - 94; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:15981700..15982917 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46261.20 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.99 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||
| Length | 405 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRARKLSIFA NFTFSVLLLY LLYIESPKST LYDNNLPFKP NVPLPRPYGP MSSSCNINSV VDSEHKEKEL DPLLPPRKAS KNQRIDWFRR KLPELEILKS 101: TTKSKSFHTR VLDLYNKNCS AQFFMIWLSP ANSFGPREML AIDTLFTTNP GACLAILSNS LDSPNGYTIL KPLFDQGFNL IAVTIDIPFL VKNTPAEAWL 201: KRLKSGNMDP GSIPLFMNLS DLTRLAVLYK YGGVYLDTDI IFLNDMTGLR NAIGAQSSDP ATKRWTRLNN AVMVFDIYHP LMREFLQEYA TTFDGNKWGY 301: NSPYLVSRVI KRLGNKPGYN NLTIFSPDAF YPVNWIKIQK LFKKPATTRE AKWVEKTVQD MNKGSYMIHL WNKVTRKIKI EEGSVMHTLV STHCTVCGNI 401: TNSHI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)