AT2G38060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphate transporter 4;2 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes an inorganic phosphate transporter (PHT4;2). | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
phosphate transporter 4;2 (PHT4;2); FUNCTIONS IN: organic anion transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plastid, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;3 (TAIR:AT3G46980.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:15922727..15925623 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55309.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.07 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.47 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 512 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATVGSLKPL HHSSCSSSFP RNPIVNRKAL LGFVFDSARK NQIRCENLRY SSESDGKRRN AAAKKRNQSP ERCAAEGVLT GGGGSEAIAE VRTMMPERIK 101: VVILTACMMC LCNADRVVMS VAVVPLADKL GWSSSFLGVV QSSFLWGYIF SSVIGGALVD RYGGKRVLAW GVALWSLATL LTPWAAAHST LALLCVRAFF 201: GLAEGVAMPS MTTLLSRWFP MDERASAVGI SMAGFHMGNV VGLLLTPLML SSIGISGPFI LFASLGLLWV STWSSGVTNN PQDSPFITRS ELRLIQAGKP 301: VQPSTISPKP NPSLRLLLSK LPTWAIIFAN VTNNWGYFVL LSWMPVYFQT VFNVNLKQAA WFSALPWATM AISGYYAGAA SDFLIRTGHS VTSVRKIMQS 401: IGFMGPGLSL LCLNFAKSPS CAAVFMTIAL SLSSFSQAGF LLNMQDIAPQ YAGFLHGISN CAGTLAAIVS TIGTGYFVQW LGSFQAFLTV TAFLYFATTV 501: FWLLFATGER VF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)