AT2G37990.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ribosome biogenesis regulatory protein (RRS1) family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ribosome biogenesis regulatory protein (RRS1) family protein; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis regulatory protein (InterPro:IPR007023); Has 425 Blast hits to 423 proteins in 207 species: Archae - 1; Bacteria - 2; Metazoa - 151; Fungi - 137; Plants - 58; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:15900713..15903028 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35532.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.56 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.03 | ||||||||||||||||||||||||||||||||||||||||
| Length | 318 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDTEMETEQI YQVDVGNLLA FNPNHRFPSA PSSRGELVKE ILTEGTKLVQ EIANKLFNFP STETNDGPIV QLPPPTTKLP REKHIPRPKP PTKWEEFALK 101: KGIQKRKKEK VVWDEQTNQF KRRHGYDRVN DDNDVPIIEA KESDEPGVDP FAKRLDDKKK RVGKQEKNRL QNLKAAEKAG ALPSHVQLAA TSLPISGTKA 201: QPKKIGKDEL GDVAGLAATS TASGGKFDKK LPGEKPPKKQ GKHHKYLPVV SGRGDVNAEK EQTNNVLSKI FSKHSHEILN VGKAINMYNV KKEKKKSGRS 301: DKLKPKKDIT KKPANKAK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)