AT2G37925.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.777 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : copper transporter 4 | ||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast | ||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
copper transporter 4 (COPT4); FUNCTIONS IN: copper ion transmembrane transporter activity, high affinity copper ion transmembrane transporter activity; INVOLVED IN: copper ion transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: Ctr copper transporter family (TAIR:AT2G26975.1); Has 161 Blast hits to 161 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:15870258..15870695 | ||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 16103.50 Da | ||||||||||||||||||||||||||||||||||||
IEP (calculated) | 10.25 | ||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.37 | ||||||||||||||||||||||||||||||||||||
Length | 145 amino acids | ||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MLSSKNVVVV EAWNTTTTTQ TQTPHRPSLL HPTFYWGYNC QVLFSGWPGS DRGMYALALI FVFFLAFLAE WLARCSDASS IKQGADKLAK VAFRTAMYTV 101: KSGFSYLVIL AVVSFNGGVF LAAIFGHALG FAVFRGRAFR NRDIQ |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)