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AT2G37910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.629
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : cation/hydrogen exchanger, putative (CHX21)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
cation/hydrogen exchanger, putative (CHX21); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cell division cycle 48C (TAIR:AT3G01610.1); Has 10 Blast hits to 10 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:BT010902EMBL:CP002685EnsemblPlants:AT2G37910EnsemblPlants:AT2G37910.1
entrez:818367GeneID:818367Gramene:AT2G37910.1HOGENOM:HOG000146341
KEGG:ath:AT2G37910ncoils:CoilOMA:LTSEDNMPIR:F84798
Proteomes:UP000006548RefSeq:NP_181327.1STRING:3702.AT2G37910.1TAIR:AT2G37910
UniGene:At.37355UniGene:At.37356UniGene:At.75442UniProt:Q6NPL8
Coordinates (TAIR10) chr2:+:15868399..15869097
Molecular Weight (calculated) 26031.10 Da
IEP (calculated) 9.29
GRAVY (calculated) -0.61
Length 232 amino acids
Sequence (TAIR10)
(BLAST)
001: MISKAQVSEQ LRLHKFVCAI QVELGFQLLT ASLLHLPNFV IRTHLPLFPR NPNLKNFEMG KRGSSSGSVP IRGFTKLVTE SRNKGLTVEE IVDDHRSNNR
101: ECVRLKRQTL MIKVKQIINS LSEEEEESEG SRTKKKQRRD DSEQRNSDLC ISSSPYSASS SGNVLTSEDN MQFDVTNDGL RVSYSNKSMT PFCADTMKKM
201: KMKGISSEEG SKNCDVEVKG PTFKDFGGLT SL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)