AT2G37450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.947 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : nodulin MtN21 /EamA-like transporter family protein | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G37460.1); Has 1785 Blast hits to 1597 proteins in 227 species: Archae - 16; Bacteria - 357; Metazoa - 0; Fungi - 0; Plants - 1369; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:15722828..15724851 | ||||||||
| Molecular Weight (calculated) | 32227.30 Da | ||||||||
| IEP (calculated) | 8.79 | ||||||||
| GRAVY (calculated) | 0.63 | ||||||||
| Length | 297 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MACMKKALPF ILMVLLQIGY AGMDILTKDV LNKGMSIYVL SVYRHGVATV VMAPFAFYFD KLESVKFQSI RSAAKVVGTV TTVGGIMVMT LVKGPALDLF 101: WTKGPSAQNT VGTDIHSSIK GAVLVTIGCF SYACFMILQA ITLKTYPAEL SLATWICLIG TIEGVVVALV MEKGNPSVWA IGWDTKLLTI TYSGIVCSAL 201: GYYIGGVVMK TRGPVFVTAF KPLCMIVVAI MSSIIFDEQM YLGRALGATV ICVGLYLVIW GKAKDYEYPS TPQIDDDLAQ ATTSKQKEQR RTVIESV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)