AT2G37440.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.986 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DNAse I-like superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:15720240..15721885 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45622.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.12 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.53 | ||||||||||||||||||||||||||||
| Length | 398 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFVGTWNVGG KSPHEGLDLK DWLKSPADAD IYVLGYAYNH INWFYRTFNI LFLEFQEIVP LNAGNVLGAE DNGPAAKWLS LIREALNNTN NLSFSGLSDD 101: TPIPCNSTPP RGYSLAASKQ MVGIFLCVWV RDDLRKRITN LKVSCVGRGI MGYLGNKGSV SISMSLHETS LCFVCTHLTS GEKEGDELRR NLDVTEIFKR 201: TRFSRSSKDS RPETIMDHDK VIWLGDLNYR LRASSDLHEQ LRNHDWESLL EKDQLKIEQR AGRIFKGWEE GKIYFAPTYK YRINSDNYVV QTEKSKEKRR 301: TPAWCDRILW KGDGMKQLWY VRGESKFSDH RPVQSLFSVH IDLKNQSNRK TKPVNQNHRP NPVLTYTCHG KVQAEEILLL TRAQSCIDTL PRLISSAS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)