AT2G37070.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53320.1); Has 1323 Blast hits to 775 proteins in 176 species: Archae - 0; Bacteria - 113; Metazoa - 351; Fungi - 175; Plants - 115; Viruses - 13; Other Eukaryotes - 556 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:15578415..15581125 | ||||||||||||||||||||
| Molecular Weight (calculated) | 57226.00 Da | ||||||||||||||||||||
| IEP (calculated) | 9.79 | ||||||||||||||||||||
| GRAVY (calculated) | -0.75 | ||||||||||||||||||||
| Length | 530 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGEEKENWRS ELDDINGLSL IDFSAEDDNL LLSSFLDPTT FDFSDTDKED RGLCLFGDTH NCCDEETLGS TTLEEKEPHK IMKTNLRKSL AWDKAFFTNA 101: GVLEPDELSS MMGRKSLPAV QEDLHRSTES MSTLKSDCTV ETGQEFFMCD AATPDKRKDL GSTEAVPSPT TSTLDDPSSE EKMKPNPIRK RPGIRSQGLA 201: KATKHPVASE EHNTSISRPS TGLNRPSSGL SKTKRASVDT NKAKQETNPK SSGGKEPLAS RVPISRRPRP IVSTPVVPFK SALRSSVASK NELTSSCSSI 301: ESCLSVSSTA SNKPSIHSVK QKKDQSLRIA SHSLANRPKS SAGSRNIDQL KVPPVSAGRT YKFNVSRLSS SVDWSSESPR AFTPNKMAKG NKKSVHGDNG 401: PPTDYTTQTL KPLNNSKDVS VVQDDPKPSA SMMKPTGLRV PSPKVGYFDG ARGSVARTPT GSCTGPVSGL SKHGACSPDE FTPSRTAKSQ PTMSKAAVRP 501: VSRSSRLIVS ASPKLTNKRY SKVSAEEQLG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)