AT2G37050.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G67720.1); Has 171956 Blast hits to 128721 proteins in 4916 species: Archae - 120; Bacteria - 14857; Metazoa - 46912; Fungi - 10709; Plants - 78380; Viruses - 428; Other Eukaryotes - 20550 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:15569290..15573477 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 103490.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.56 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 933 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVRISLLLLC LLVSTCLFTS SSAQAPGFVS LDCGGAEPFT DELGLKWSPD NHLIYGETAN ISSVNETRTQ YTTLRHFPAD SRKYCYTLNV TSRNRYLIRA 101: TFLYGNFDNS NNVYPKFDIS LGATHWATIV ISETYIIETA ELVFLASSPT VSVCLSNATT GQPFISTLEL RQLSGSMYGS MLSEDRFYLS VAARINFGAE 201: SEASVRYPDD PYDRIWESDL QKKPNYLVDV AAGTVRVSTT LPIESRVDDR PPQKVMQTAV VGTNGSLTYR MNLDGFPGFG WAFTYFAEIE DLAEDESRKF 301: RLVLPEQPEY SKSVVNIKEN TQRPYRVYAP GYPNITLPFV LNFRFAKTAD SSRGPILNAM EISKYLRKSD GSVDATVMAN VASLYSSTEW AQEGGDPCSP 401: SPWSWVQCNS DPQPRVVAIK LSSMNLTGNI PSDLVKLTGL VELWLDGNSF TGPIPDFSRC PNLEIIHLEN NRLTGKIPSS LTKLPNLKEL YLQNNVLTGT 501: IPSDLAKDVI SNFSGNLNLE KSGDKGKKLG VIIGASVGAF VLLIATIISC IVMCKSKKNN KLGKTSELTN RPLPIQRVSS TLSEAHGDAA HCFTLYEIEE 601: ATKKFEKRIG SGGFGIVYYG KTREGKEIAV KVLANNSYQG KREFANEVTL LSRIHHRNLV QFLGYCQEEG KNMLVYEFMH NGTLKEHLYG VVPRDRRISW 701: IKRLEIAEDA ARGIEYLHTG CVPAIIHRDL KTSNILLDKH MRAKVSDFGL SKFAVDGTSH VSSIVRGTVG YLDPEYYISQ QLTEKSDVYS FGVILLELMS 801: GQEAISNESF GVNCRNIVQW AKMHIDNGDI RGIIDPALAE DDYSLQSMWK IAEKALLCVK PHGNMRPSMS EVQKDIQDAI RIEKEALAAR GGISDEFSRS 901: SAHSSSLNMG MLDLAGSQSY VSIDESVLQP TAR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)