AT2G36540.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36550.1); Has 198 Blast hits to 198 proteins in 57 species: Archae - 0; Bacteria - 12; Metazoa - 2; Fungi - 47; Plants - 115; Viruses - 4; Other Eukaryotes - 18 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:15325237..15326449 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 28164.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.90 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.45 | ||||||||||||||||||||||||||||||||
| Length | 249 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAEEKIKKSL LAADDSDDEY SRGDTVSDQT ELSSILDKLS LEPKTEKKKL LVLSLSGLLL HRVHKKELRK KPKNRSPDAS CGPNLVYKRP FAEEFMKFCL 101: ERFEVGIWSS ACELVSSLNI LIVTGPRECT DSGYKTLENR YKPLFFKDLS KVFKCFKGFS ASNTIFIDDE PYKALRNPDN TGLFPMSYDA SNIKDNLLDP 201: EGELCSYLEG LAKSSDVQAY IKVHSFGRPM IDSSHPDWSF YSNVSKIVS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)