AT2G36200.2
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.992 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:15180078..15185189 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 117502.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.82 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.64 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 1040 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
0001: MSSRHDKEKG VNVQVLLRCR PFSDDELRSN APQVLTCNDL QREVAVSQNI AGKHIDRVFT FDKVFGPSAQ QKDLYDQAVV PIVNEVLEGF NCTIFAYGQT 0101: GTGKTYTMEG ECRRSKSAPC GGLPAEAGVI PRAVKQIFDT LEGQQAEYSV KVTFLELYNE EITDLLAPED LSRVAAEEKQ KKPLPLMEDG KGGVLVRGLE 0201: EEIVTSANEI FTLLERGSSK RRTAETFLNK QSSRSHSLFS ITIHIKEATP EGEELIKCGK LNLVDLAGSE NISRSGARDG RAREAGEINK SLLTLGRVIS 0301: ALVEHLGHVP YRDSKLTRLL RDSLGGRTKT CIIATVSPAV HCLEETLSTL DYAHRAKNIR NKPEVNQKMM KSTLIKDLYG EIERLKAEVY ASREKNGVYM 0401: PKERYYQEES ERKVMAEQIE QMGGQIENYQ KVSFFLLCRS KFYTYMWELH VNNGYLHICC DQQLEELQDK YVGQVRECSD LTTKLDITEK NLSQTCKVLA 0501: STNEELKKSQ YAMKEKDFII SEQKKSENVL VQQACILQSN LEKATKDNSS LHQKIGREDK LSADNRKVVD NYQVELSEQI SNLFNRVASC LSQQNVHLQG 0601: VNKLSQSRLE AHNKAILEMK KKVKASRDLY SSHLEAVQNV VRLHKANANA CLEEVSALTT SSACSIDEFL ASGDETTSSL FDELQSALSS HQGEMALFAR 0701: ELRQRFHTTM EQTQEMSEYT STFFQKLMEE SKNAETRAAE ANDSQINSII DFQKTYEAQS KSDTDKLIAD LTNLVSSHIR RQHELVDSRL HNFKDAVSSN 0801: KTFLDEHVSA VNNLTKDAKR KWETFSMQAE NEAREGADFS AAKHCRMELL LQQSVGHAES AFKHCKITHE SLKEMTSKQV TDVSSLVRSA CDSNEQHDAE 0901: VDSARTAAEK DVTKNSDDII QQIERMSEDE KASVSKILEN VRSHEKTLES FQQDQCCQAR CIEDKAQETF QQQYMEYEPT GATPTKNEPE IPTKATIESL 1001: RAMPIETLVE EFRENNSYES FATKETKPQQ LTRSPLSQVN |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)