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AT2G35795.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:27943495 (2017): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21311031 (2011): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Chaperone DnaJ-domain superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G09700.1); Has 912 Blast hits to 912 proteins in 301 species: Archae - 0; Bacteria - 183; Metazoa - 207; Fungi - 194; Plants - 95; Viruses - 5; Other Eukaryotes - 228 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2214eggNOG:KOG0723EMBL:AC006068EMBL:AC007017
EMBL:AK228834EMBL:AY084569EMBL:BT028952EMBL:CP002685
EnsemblPlants:AT2G35795EnsemblPlants:AT2G35795.1entrez:818152Gene3D:1.10.287.110
GeneID:818152Genevisible:Q8RV04GO:GO:0005743GO:GO:0016021
Gramene:AT2G35795.1hmmpanther:PTHR12763hmmpanther:PTHR12763:SF30HOGENOM:HOG000115841
InParanoid:Q8RV04InterPro:IPR001623KEGG:ath:AT2G35795KO:K09539
OMA:DAGGSHFPaxDb:Q8RV04Pfam:Q8RV04PhylomeDB:Q8RV04
PRIDE:Q8RV04PRO:PR:Q8RV04ProteinModelPortal:Q8RV04Proteomes:UP000006548
RefSeq:NP_565824.1SMART:SM00271SMR:Q8RV04STRING:3702.AT2G35795.1
SUPFAM:SSF46565TAIR:AT2G35795UniGene:At.37624UniProt:Q8RV04
Coordinates (TAIR10) chr2:+:15042321..15043334
Molecular Weight (calculated) 11997.70 Da
IEP (calculated) 10.96
GRAVY (calculated) -0.19
Length 112 amino acids
Sequence (TAIR10)
(BLAST)
001: MATPFIAGVA VAATALAGRY GIQAWQAFKA RPPRPKIKKF YEGGFQPTMT KREAALILGV RESVAAEKVK EAHRKVMVAN HPDAGGSHFL ASKINEAKDV
101: MLGKTKNSGS AF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)