AT2G35080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : nucleotide binding;ATP binding;aminoacyl-tRNA ligases | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: aminoacyl-tRNA ligases;ATP binding;nucleotide binding (TAIR:AT3G42723.1); Has 7 Blast hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:14789245..14791448 | ||||||||||||||||
| Molecular Weight (calculated) | 26551.70 Da | ||||||||||||||||
| IEP (calculated) | 8.88 | ||||||||||||||||
| GRAVY (calculated) | -0.68 | ||||||||||||||||
| Length | 227 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVQANTYDAR NELKEAVHRK HRGYSWLSKL GETWQDHTFA FSHNQDWISF SNKEEELKQN TNKMKMWSEY VKKGIEDEQI SDCGMVVDDY LEDKFGFSGE 101: GNGRVCKETL FTLGCTFTFS RKISEKTKSV DLNHPPFSLI RDFFVSWKVA EMDKAKFEFA KRVCSFMISF VIAGAGVTTG LQMLKENQIE VEGRTEEVKE 201: AKARNQRLRK VKINEQWIKL QEKLFKK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)