AT2G35050.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 123661 Blast hits to 120809 proteins in 5002 species: Archae - 120; Bacteria - 13694; Metazoa - 47002; Fungi - 10895; Plants - 32616; Viruses - 447; Other Eukaryotes - 18887 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:14769708..14774796 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 139713.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.84 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1257 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MDQAKGYEHV RYTAPDPRDE GLGSINQRFS HDSSTNVNTY VRPPDYGVST PARPVLNYSI QTGEEFAFEF MRDRVIMKPQ FIPNVYGEHS GMPVSVNLSA 0101: LGMVHPMSES GPNATVLNIE EKRQSFEHER KPPSRIEDKT YHELVQSAPV ISSKNDTGQR RHSLVSSRAS DSSLNRAKFL CSFGGKVIPR PRDQKLRYVG 0201: GETRIIRISK TISFQELMHK MKEIFPEART IKYQLPGEDL DALVSVSSDE DLQNMMEECI VFGNGGSEKP RMFLFSSSDI EEAQFVMEHA EGDSEVQYVV 0301: AVNGMDLSSR RSSLGLSPPG NNLDELLHGN FDRKIDRAAT EPAVASLTPL AGNESLPASQ TSQPVTGFST GNEPFSQPYL GQQLQFPGLG NHQIYTSGHM 0401: ASIGYIDEKR SAPLHVQPQP HYIPYSVNPE TPLESLVPHY PQKPEQGFLR EEQIFHVQDP ETSSKEAKMR RDDSFQKVND HPISTVESNL SAKEPKMRRE 0501: SSTPRVNEYP VSSMPSDLIV PDDLPKEEAP IVTQTSSSTP DPSSSTLSEK SLRKSEDHVE NNLSAKEPKM RKEHSTTRVN EYSVSSVSSD SMVPDQALKE 0601: EAPISMKISN STPDPKSLVY PEKSLRTSQE KTGAFDTTNE GMKKNQDNQF CLLGGFSVSG HGTSNNSSSN VSNFDQPVTQ QRVFHSERTV RDPTETNRLS 0701: KSDDSLASQF VMAQTTSDAF LPISESSETS HEANMESQNV HPTAPVIPAP DSIWTAEGSM SQSEKKNVET NTPEHVSQTE TSAKAVPQGH NEKGDIVVDI 0801: NDRFPREFLA DILKTKESLN FPGLGPLHAD GAGVSLNIQN NDPKTWSYFR NLAQDEFERK DLSLMDQDHP GFPTSMTNTN GVPIDYSYPP LQSEKVASSQ 0901: IHPQIHFDGN IKPDVSTITI PDLNTVDTQE DYSQSQIKGA ESTDATLNAG VPLIDFMAAD SGMRSLQVIK NDDLEELKEL GSGTFGTVYH GKWRGTDVAI 1001: KRIKRSCFIG RSSEQERLTS EFWHEAEILS KLHHPNVMAF YGVVKDGPGG TLATVTEYMV NGSLRHVLLS NRHLDRRKRL IIAMDAAFGM EYLHSKSIVH 1101: FDLKCDNLLV NLKDPARPIC KVGDFGLSKI KRNTLVTGGV RGTLPWMAPE LLSGSSSKVS EKVDVFSFGI VLWEILTGEE PYANMHYGAI IGGIVNNTLR 1201: PTVPNYCDPE WRMLMEQCWA PDPFVRPAFP EIARRLRTMS SSAVHTKPHA VNHQIHK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)