AT2G34315.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.631 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Avirulence induced gene (AIG1) family protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Avirulence induced gene (AIG1) family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, root, stamen; EXPRESSED DURING: 4 anthesis, D bilateral stage; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: Avirulence induced gene (AIG1) family protein (TAIR:AT1G33950.2); Has 103 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 2; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:14480254..14483056 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 27927.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.95 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||
| Length | 246 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDTCMQELIA GDQNMADQDF PSVINIVLLV KLLDHVAATQ NQNSGHPYTH QVEHALKQNE ETYDKEMQHC VIDVSNSTDK NMADQELPPS VTSIVLVGRN 101: NGNGKSFTGN TLLGEKLFIS KADAGGVTME EDDKLKEKER EIESKSLAEA EVIAMKERSR KEHDHTMNMA HEEVEHALKQ NTETHEKETQ HHVIDVSDST 201: ADEVVIKDRP HRFGVIVSQL LNHHLLLFCV FYCFCFFYFC IFPTLL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)