AT2G34230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.871 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein with domains of unknown function (DUF627 and DUF629) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein with domains of unknown function (DUF627 and DUF629); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF627 and DUF629) (TAIR:AT2G34220.1); Has 93 Blast hits to 93 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:14454639..14456969 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 83890.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.99 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||
| Length | 716 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMKNPEKKYD KETKKEIDDE YNLAKGYWKK GNRIEALMLT EKTISDQGKN ESSCYVHHEL QGDIFYQLAE ETEITNDIKR VYLFASLDAF SMFTLPCHDA 101: LKSFRGCVLS LIQLGDQLGI KKFYRKAASK AYQALSVTNS SEKYTALNKE FDGWYGYAEE KKKEKNSNAV VTVSETSTMA NQMVLKKKNP FQQLKFFWVN 201: LDDKTKRDFL VVDFRKLIEY IQNEYGKEVK RYFRKCVISL ISLHWRYWKC HICSQVNYCF TDCKMHILDK HVHKYEPEFS DRPKYVDEIL ADMICCGDWK 301: PVDIAQAANL INDRIKSQKE FVYVNGWCSD WPVAGDEKRE TILKQFSEVL KASCPRENCT LSCTLWDWLI DYTEEHLDLP GVSGSYLDKC SFFKNPQCIC 401: FLDLKHLKHI LKKFSQLTTD VRESLVSKVV NQLWENSLVK ERLDLEGHTN SNLLLDKRLL CEEELELDQN ETVEHYESTG IYEDVMPKGD KIVSWILDCP 501: KIDKEFMSQM AKVAKGLHNR EIWLAVLRIV QGLVRKKESY YDKRRKMLSY EKMLCEVETI CDREDTRKNV NQRSTYEFAL RTECEKLVGK QDDNRKYFWT 601: VVKDVFVKLC PPVFGVLEDM ECISKLSATV SNDEVKKSML RLRKSLKEMF LLIDSKILRN ECTYKKLIDV FPKLSVVEYR LVVLPLVKKF LQDKLKKMME 701: TNSNSVAAGD SVNMQG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)