AT2G33600.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G33590.1); Has 13587 Blast hits to 13572 proteins in 2016 species: Archae - 236; Bacteria - 6094; Metazoa - 449; Fungi - 930; Plants - 2647; Viruses - 67; Other Eukaryotes - 3164 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:14226873..14228498 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35616.80 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.43 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||
| Length | 321 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAVVQKGKVC VTGAGGFLGS WVVNHLLSRD YFVHGTVRDP GNEKYAHLKK LDKAGDKLKL FKADLLNYGS LQSAIAGCSG VFHVACPVPS ASVPNPEVDL 101: IAPAVDGTLN VLKACVEAKV KRVVYVSSVS AVAMNPMWSK SQVLDETAWS DQDYCKKTEN WYSLSKTRAE SEAFEFAKRT GLDLVSVCPT LVLGPVLQQH 201: TVNASSLVLL KLLKEGYESR NNQERHLVDV RDVAQALLLV YEKAEAEGRY ICIGHTVREQ EVAEKLKSLY LNYNYPKRYI EADGKVKVSS EKLQKLGWTY 301: RPLEETLVDS VESYRKAKLV D |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)