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AT2G33310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : auxin-induced protein 13
Curator
Summary (TAIR10)
Auxin induced gene, IAA13 (IAA13).
Computational
Description (TAIR10)
auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 1984 Blast hits to 1983 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1983; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT2G33310EnsemblPlants:AT2G33310.1entrez:817894hmmpanther:PTHR31734
hmmpanther:PTHR31734:SF10Pfam:PF02309Pfscan:PS51745SUPFAM:SSF54277
tair10-symbols:IAA13
Coordinates (TAIR10) chr2:-:14114569..14115757
Molecular Weight (calculated) 26643.70 Da
IEP (calculated) 10.03
GRAVY (calculated) -0.61
Length 246 amino acids
Sequence (TAIR10)
(BLAST)
001: MITELEMGKG ESELELGLGL SLGGGTAAKI GKSGGGGAWG ERGRLLTAKD FPSVGSKRAA DSASHAGSSP PRSSQVVGWP PIGSHRMNSL VNNQATKSAR
101: EEEEAGKKKV KDDEPKDVTK KVNGKVQVGF IKVNMDGVAI GRKVDLNAHS SYENLAQTLE DMFFRTNPGT VGLTSQFTKP LRLLDGSSEF VLTYEDKEGD
201: WMLVGDVPWR MFINSVKRLR VMKTSEANGL AARNQEPNER QRKQPV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)